Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C247Uncharacterized protein. (448 aa)    
Predicted Functional Partners:
A0A484DB61
NTR domain-containing protein.
   
 0.883
A0A484CUB7
MACPF domain-containing protein.
   
    0.842
A0A484CC61
Uncharacterized protein.
   
 
 0.807
A0A484CI39
LRRNT domain-containing protein.
   
 
 0.779
A0A484CEC6
Uncharacterized protein; Belongs to the peptidase S1 family.
   
  
 0.715
A0A484CY94
MSP domain-containing protein.
      
 0.702
A0A484C0J9
Uncharacterized protein.
      
 0.628
A0A484CHH9
TFCD_C domain-containing protein.
      
 0.624
A0A484DJ71
DAO domain-containing protein.
      
 0.622
A0A484BY94
Peptidase_M14 domain-containing protein.
   
 
 0.605
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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