STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C252LIM zinc-binding domain-containing protein. (1813 aa)    
Predicted Functional Partners:
A0A484DQ18
Uncharacterized protein.
   
 
 0.797
A0A484D3G2
WH2 domain-containing protein.
   
 0.699
A0A484CDA3
Uncharacterized protein.
   
  
 0.671
A0A484D4I4
Uncharacterized protein.
   
 0.671
A0A484DNC9
Uncharacterized protein.
   
  
 0.671
A0A484CHP6
Uncharacterized protein.
   
  
 0.622
A0A484CVU1
Uncharacterized protein.
   
 
  0.618
A0A484C7E4
Uncharacterized protein.
   
 0.610
A0A484CBL0
Uncharacterized protein.
   
 0.610
A0A484CHK5
Uncharacterized protein.
   
 0.610
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.