STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C252LIM zinc-binding domain-containing protein. (1813 aa)    
Predicted Functional Partners:
A0A484CK92
Uncharacterized protein.
   
 
 0.860
A0A484DB74
Uncharacterized protein.
   
 
 0.860
A0A484DQ18
Uncharacterized protein.
   
 
 0.839
A0A484C597
Uncharacterized protein.
   
 0.830
A0A484CQZ1
Uncharacterized protein.
   
 0.830
A0A484CVS3
LIM zinc-binding domain-containing protein.
   
 0.830
A0A484D3G2
WH2 domain-containing protein.
   
 0.817
A0A484CHP6
Uncharacterized protein.
   
  
 0.790
A0A484D4I4
Uncharacterized protein.
   
 0.772
A0A484CDA3
Uncharacterized protein.
   
  
 0.768
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.