Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C272Uncharacterized protein. (1812 aa)    
Predicted Functional Partners:
A0A484DN83
MPN domain-containing protein.
   
 0.959
A0A484DC19
Proteasome subunit alpha type.
    
 0.952
A0A484CJQ7
Proteasome subunit beta.
    
 0.949
A0A484C8U8
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.948
A0A484C463
Proteasome subunit alpha type.
    
 0.946
A0A484DHK9
Proteasome subunit alpha type.
    
 0.945
A0A484D3Y4
Proteasome subunit alpha type.
    
 0.944
A0A484DPD5
Proteasome subunit beta.
    
 0.941
A0A484CQ84
Proteasome subunit alpha type.
    
 0.930
A0A484CQW0
PCI domain-containing protein.
    
 0.927
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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