Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C279Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (445 aa)    
Predicted Functional Partners:
A0A484CC57
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.938
A0A484CSR8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.938
A0A484DEC6
Phosphoserine aminotransferase.
  
 0.929
A0A484CCF6
Uncharacterized protein.
    
 0.921
A0A484DFR7
Uncharacterized protein.
    
 0.921
A0A484DN01
Uncharacterized protein.
    
 0.921
A0A484CHQ0
Uncharacterized protein.
 
   
  0.907
A0A484CWQ2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.901
A0A484CXJ1
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.901
A0A484CMQ8
HMG box domain-containing protein.
    
 0.870
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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