Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C287Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
A0A484CYF7
RING-type domain-containing protein.
    
 
 0.728
A0A484CGK8
Uncharacterized protein.
      
 0.629
A0A484D8W2
Uncharacterized protein.
      
 0.534
A0A484C828
ANK_REP_REGION domain-containing protein.
      
 0.503
A0A484BYS3
Uncharacterized protein.
      
 0.502
A0A484DRR8
MYND-type domain-containing protein.
      
 0.490
A0A484CKM4
Uncharacterized protein.
    
   0.487
A0A484CZQ4
SPATA6 domain-containing protein.
      
 0.464
A0A484C217
Uncharacterized protein.
      
 0.445
EIF3K
Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.445
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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