Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C296Ubiquitin-like domain-containing protein. (119 aa)    
Predicted Functional Partners:
A0A484CKX6
RING-type domain-containing protein.
   
 0.996
A0A484C6A2
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.993
A0A484C076
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.988
A0A484DJ50
RING-type domain-containing protein.
   
 0.988
A0A484DG35
Uncharacterized protein.
    
 0.976
A0A484CN43
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.975
A0A484DKZ0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.975
A0A484CTS3
UBX domain-containing protein.
    
 0.964
A0A484C492
Uncharacterized protein.
    
 0.962
A0A484CB84
TFIIS N-terminal domain-containing protein.
   
 0.958
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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