STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C2F8FHA domain-containing protein. (1885 aa)    
Predicted Functional Partners:
A0A484DDW9
Uncharacterized protein.
    
 0.767
A0A484C5E1
Helicase C-terminal domain-containing protein.
    
 0.738
A0A484CB36
Helicase ATP-binding domain-containing protein.
    
 0.738
A0A484CH80
DNA polymerase.
   
 0.721
A0A484DK79
Small nuclear ribonucleoprotein Sm D2.
   
 0.719
A0A484C6F1
ERCC4 domain-containing protein.
    
 0.680
A0A484CAP4
Uncharacterized protein.
   
 0.673
A0A484DJ17
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.668
A0A484D780
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.667
A0A484DC07
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.657
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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