Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A484C2N2Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (472 aa)    
Predicted Functional Partners:
A0A484DBT7
Uncharacterized protein.
     
 0.924
A0A484CZ43
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.917
A0A484CSF8
Uncharacterized protein.
    
 
 0.711
A0A484CTJ2
AMP-binding domain-containing protein.
   
 
 0.709
A0A484CYG2
AMP-binding domain-containing protein.
   
 
 0.709
A0A484DIC2
Uncharacterized protein.
   
 
 0.709
A0A484CSI5
AMP-binding domain-containing protein.
     
 0.697
A0A484CY66
Uncharacterized protein.
     
 0.697
A0A484DF30
AMP-binding domain-containing protein.
     
 0.697
A0A484DM57
Uncharacterized protein.
     
 0.697
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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