Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C2P4Uncharacterized protein. (876 aa)    
Predicted Functional Partners:
A0A484D477
Carbohydrate sulfotransferase.
      
 0.876
A0A484CTQ8
GMP_PDE_delta domain-containing protein.
    
 
 0.875
A0A484CPC9
Poly [ADP-ribose] polymerase.
      
 0.869
A0A484C2G5
Uncharacterized protein.
      
 0.703
A0A484C6P3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.672
A0A484BZ83
DEP domain-containing protein.
      
 0.652
A0A484CIL3
Uncharacterized protein.
      
 0.630
A0A484CJC4
Uncharacterized protein.
      
 0.630
A0A484CBP8
Uncharacterized protein.
      
 0.628
A0A484CC52
Uncharacterized protein.
      
 0.628
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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