STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C2W4Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
A0A484CFL6
THAP-type domain-containing protein.
    
 0.931
A0A484CFV5
RING-type domain-containing protein.
    
 0.893
A0A484CJD0
RING-type domain-containing protein.
    
 0.891
A0A484CRC9
RING-type domain-containing protein.
    
 0.891
A0A484CA65
Uncharacterized protein.
    
 0.877
A0A484CWM2
RAWUL domain-containing protein.
    
 0.874
A0A484CEP9
Uncharacterized protein.
    
 0.853
A0A484CT46
Transcription factor.
   
 0.823
A0A484C3G9
BHLH domain-containing protein.
   
 0.820
A0A484C8J1
BHLH domain-containing protein.
   
 0.820
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.