STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C308Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
A0A484CYD1
Uncharacterized protein.
    
 0.993
A0A484CDE3
Uncharacterized protein.
    
 0.944
A0A484CRA8
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.932
A0A484DPE2
Mannosyltransferase.
     
 0.929
A0A484D5P0
Uncharacterized protein.
     
 0.921
A0A484CLP6
Uncharacterized protein.
     
 0.889
A0A484CPT6
Uncharacterized protein.
     
 0.877
A0A484DFY7
Uncharacterized protein.
     
 0.864
A0A484CEA1
Aminotran_1_2 domain-containing protein.
     
 0.863
A0A484CQP9
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.847
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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