STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C336TNFR-Cys domain-containing protein. (265 aa)    
Predicted Functional Partners:
A0A484CYP1
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
 
 0.998
A0A484CMX3
Calcium signal-modulating cyclophilin ligand; Likely involved in the mobilization of calcium as a result of the TCR/CD3 complex interaction. Binds to cyclophilin B.
    
 
 0.968
A0A484DN91
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.815
A0A484CEH8
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.757
A0A484CJB0
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.757
A0A484DAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.757
A0A484C3F2
Uncharacterized protein.
    
 
 0.626
A0A484DK85
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.626
A0A484C7J8
Uncharacterized protein.
   
  
 0.567
A0A484C9Z1
Syndecan domain-containing protein.
      
 0.530
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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