Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C341Uncharacterized protein. (1216 aa)    
Predicted Functional Partners:
A0A484C279
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.740
A0A484CBQ0
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.740
A0A484CHQ0
Uncharacterized protein.
   
 0.740
A0A484CWQ2
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.740
A0A484CXJ1
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.740
A0A484CC43
Deacetylase sirtuin-type domain-containing protein.
    
 0.716
A0A484CC57
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.661
A0A484CEH1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.661
A0A484CSR8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.661
A0A484DEB5
Uncharacterized protein.
    
  0.613
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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