Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C345Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
   
 
 0.672
A0A484CHU9
Uncharacterized protein.
    
  0.549
A0A484D239
Uncharacterized protein.
    
 0.548
A0A484DA58
Malate dehydrogenase.
    
 0.532
A0A484CAU6
Uncharacterized protein.
      
 0.509
A0A484CGL1
Uncharacterized protein.
      
 0.509
A0A484CW50
PID domain-containing protein.
      
 0.504
A0A484CV08
Death domain-containing protein.
    
  0.500
A0A484D2Z8
Uncharacterized protein.
    
  0.500
A0A484CVU3
Uncharacterized protein.
    
  0.483
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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