Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C380Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.753
A0A484D265
RAG2_PHD domain-containing protein.
   
 0.753
A0A484CVU7
Uncharacterized protein.
    
 0.741
A0A484D0H6
Uncharacterized protein.
    
 0.676
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
 0.671
A0A484C174
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.663
A0A484DJX1
Uncharacterized protein.
    
 
 0.663
A0A484DI70
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.638
A0A484CHA6
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.569
A0A484CIS8
Uncharacterized protein.
    
  0.562
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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