STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C388Uncharacterized protein. (142 aa)    
Predicted Functional Partners:
A0A484C1V0
Uncharacterized protein.
   
 0.988
A0A484CBG6
RPOLD domain-containing protein.
   
 0.984
A0A484D8B1
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.984
A0A484D094
Uncharacterized protein.
   
 0.983
A0A484CMM2
RPOL4c domain-containing protein.
   
 0.982
A0A484CN77
Uncharacterized protein.
   
 0.982
A0A484D0Q1
Uncharacterized protein.
   
 0.982
A0A484CN67
Uncharacterized protein.
   
 0.981
A0A484CY41
RNA_pol_L_2 domain-containing protein.
   
 0.980
A0A484DNM7
Uncharacterized protein.
    
 0.980
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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