Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C399Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
A0A484CZB5
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.999
A0A484DQ63
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 0.999
A0A484CQK2
ATP-dependent Clp protease proteolytic subunit.
    
 0.959
A0A484C4L6
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.939
A0A484C3W2
Nrf1_DNA-bind domain-containing protein.
    
 0.920
A0A484C960
Ribosomal_S10 domain-containing protein.
   
  0.913
A0A484BZ54
Uncharacterized protein.
   
 0.908
A0A484D6J1
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.894
A0A484DHZ3
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.876
A0A484D074
AAA domain-containing protein.
   
  0.862
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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