Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3C2Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A0A484CZC5
UBX domain-containing protein.
   
   0.856
A0A484D6R6
Uncharacterized protein.
    
   0.831
A0A484C3Q7
BTP domain-containing protein.
      
 0.626
A0A484C7T6
GIDA_assoc domain-containing protein.
      
 0.626
A0A484D9N4
Uncharacterized protein.
      
 0.619
A0A484DN52
Uncharacterized protein.
   
   0.578
A0A484CWN5
Uncharacterized protein; Belongs to the AAA ATPase family.
    
   0.565
A0A484CWY6
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.565
A0A484DC86
Uncharacterized protein; Belongs to the AAA ATPase family.
    
   0.565
A0A484DL79
Uncharacterized protein; Belongs to the AAA ATPase family.
    
   0.565
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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