STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3E9Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
A0A484CAQ2
Uncharacterized protein.
   
 
 0.821
A0A484CEY7
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.685
A0A484DBS6
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.685
A0A484CCH1
MCM domain-containing protein; Belongs to the MCM family.
   
 
  0.624
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
 
 0.484
A0A484C0L2
MCM_lid domain-containing protein.
   
 
  0.459
A0A484CUC5
DNA helicase; Belongs to the MCM family.
   
 
  0.459
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.