STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3G0Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
A0A484CPH8
TFIIB-type domain-containing protein.
  
 0.989
A0A484CM24
Transcription initiation factor TFIID subunit.
    
 0.979
A0A484D693
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.979
A0A484D8Q0
TFIID_20kDa domain-containing protein.
    
 0.979
A0A484CMD2
TAF domain-containing protein.
   
 0.978
A0A484CT73
Uncharacterized protein.
    
 0.978
A0A484CX12
TAFII55_N domain-containing protein.
    
 0.978
A0A484DAK1
Uncharacterized protein.
    
 0.978
A0A484C2T2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.977
A0A484CEN1
SANT domain-containing protein.
    
 0.976
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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