STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3I6Epimerase domain-containing protein. (384 aa)    
Predicted Functional Partners:
A0A484DMF0
Uncharacterized protein.
  
  0.963
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.959
A0A484CER2
Aminotran_1_2 domain-containing protein.
 
 
 0.944
A0A484DFD4
Uncharacterized protein.
  
 0.910
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.898
A0A484DL08
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.888
A0A484CQ45
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.886
A0A484DLN8
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.886
A0A484CGD2
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.882
A0A484C1V1
Beta_elim_lyase domain-containing protein.
    
 0.880
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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