STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3J4Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
A0A484C6A2
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.880
A0A484CN43
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.768
A0A484DKZ0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.768
A0A484CT70
Uncharacterized protein.
    
 
 0.759
A0A484DJ50
RING-type domain-containing protein.
    
 0.711
A0A484C296
Ubiquitin-like domain-containing protein.
    
 0.660
A0A484CHL8
Uncharacterized protein.
    
 0.660
A0A484C159
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.637
A0A484CGJ2
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.637
A0A484CNI8
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.637
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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