STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3T8Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
A0A484C8U6
Thymidylat_synt domain-containing protein.
    
  0.721
A0A484DQX3
Suf domain-containing protein.
    
  0.708
A0A484DKW4
Thymidine kinase.
    
  0.706
A0A484CP20
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.644
A0A484D8M8
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.644
A0A484DAM5
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.644
A0A484CSC8
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.564
A0A484DHB9
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.564
A0A484C4J7
Thymidylate_kin domain-containing protein.
    
 0.562
A0A484D0C3
Thymidylate_kin domain-containing protein.
    
 0.562
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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