STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C3V4SEC7 domain-containing protein. (1252 aa)    
Predicted Functional Partners:
A0A484CGE6
SEC7 domain-containing protein.
     
0.696
A0A484C2K2
Uncharacterized protein.
    
0.568
A0A484C3L3
Uncharacterized protein.
    
0.568
A0A484CGP3
Uncharacterized protein.
    
0.568
A0A484CHB2
Uncharacterized protein.
    
0.568
A0A484CHM7
Uncharacterized protein.
    
0.568
A0A484D9A1
Uncharacterized protein.
    
0.568
A0A484DJS1
Uncharacterized protein.
    
0.568
A0A484C6F8
SEC7 domain-containing protein.
     
0.556
A0A484D8R8
SEC7 domain-containing protein.
     
0.556
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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