Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C418Uncharacterized protein. (1302 aa)    
Predicted Functional Partners:
A0A484BZR8
Uncharacterized protein.
   
0.962
A0A484D475
Uncharacterized protein.
   
0.962
A0A484D2A6
Uncharacterized protein.
  
  
 
0.901
A0A484DE38
Uncharacterized protein.
   
 0.774
A0A484C642
Neuropilin; Belongs to the neuropilin family.
    
 0.732
A0A484CQU0
Uncharacterized protein.
   
 0.661
A0A484C1R6
Death domain-containing protein.
    
 0.659
A0A484C1R7
Uncharacterized protein.
    
 0.659
A0A484C7R1
Uncharacterized protein.
    
 0.659
A0A484C7R2
Uncharacterized protein.
    
 0.659
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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