Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C453Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (688 aa)    
Predicted Functional Partners:
A0A484CFK1
Uncharacterized protein.
    
0.917
A0A484DDP5
Uncharacterized protein.
    
0.917
A0A484CH09
Uncharacterized protein.
    
0.880
A0A484CZJ4
Uncharacterized protein.
    
0.880
A0A484CUM0
Uncharacterized protein.
   
 0.806
A0A484CI59
Uncharacterized protein.
    
 
 0.688
A0A484CCF6
Uncharacterized protein.
    
 0.677
A0A484DN01
Uncharacterized protein.
    
 0.677
A0A484CB19
Uncharacterized protein.
    
 0.674
A0A484CBB4
Uncharacterized protein.
    
 0.674
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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