STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C4573'-5' exonuclease domain-containing protein. (567 aa)    
Predicted Functional Partners:
A0A484C0R4
Uncharacterized protein.
    
 
 0.781
A0A484D367
Uncharacterized protein.
    
 
 0.781
A0A484D590
Uncharacterized protein.
    
 
 0.781
A0A484D6G2
Uncharacterized protein.
    
 
 0.781
A0A484DF60
Uncharacterized protein.
    
 
 0.781
A0A484CSE3
Dynein light chain.
    
 
 0.772
A0A484DC08
Dynein light chain.
    
 
 0.772
A0A484DJI3
Dynein light chain.
    
 
 0.772
A0A484DL56
Dynein light chain.
    
 
 0.733
A0A484CGS7
Peptidylprolyl isomerase.
   
  
 0.574
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.