Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C458Uncharacterized protein. (1426 aa)    
Predicted Functional Partners:
A0A484DDE8
TPR_REGION domain-containing protein.
    
 0.906
A0A484CFN7
Uncharacterized protein.
      
 0.769
A0A484D3S5
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.764
A0A484CY90
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.716
A0A484CK43
TPR_REGION domain-containing protein.
    
 0.705
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
 0.693
A0A484CVR8
RING-type domain-containing protein.
    
 0.693
A0A484CVS8
Uncharacterized protein.
    
 0.693
A0A484C394
RRM domain-containing protein.
    
 
 0.689
A0A484C5E1
Helicase C-terminal domain-containing protein.
    
  0.689
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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