Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C466Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
A0A484D0D6
RNA helicase.
   
 0.884
A0A484C733
Uncharacterized protein.
    
 0.880
A0A484DL74
Uncharacterized protein.
    
 0.880
A0A484CA11
G-patch domain-containing protein.
    
 
 0.875
A0A484CW56
RNA helicase.
    
  0.866
A0A484DF24
Uncharacterized protein.
    
 
 0.842
A0A484DC75
Nucleolar protein 6.
   
 
 0.840
A0A484C1I6
MI domain-containing protein.
    
   0.831
A0A484CU28
S4 RNA-binding domain-containing protein.
    
   0.831
A0A484DF84
Sas10 domain-containing protein.
   
   0.831
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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