STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C466Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
A0A484C733
Uncharacterized protein.
    
 0.924
A0A484DL74
Uncharacterized protein.
    
 0.924
A0A484D0D6
RNA helicase.
    
 0.909
A0A484CW56
RNA helicase.
    
  0.903
A0A484CA11
G-patch domain-containing protein.
    
 
 0.888
A0A484DC75
Nucleolar protein 6.
   
 
 0.885
A0A484DF24
Uncharacterized protein.
    
 
 0.882
A0A484DM33
Uncharacterized protein.
    
 
 0.880
A0A484C1I6
MI domain-containing protein.
    
   0.875
A0A484CU28
S4 RNA-binding domain-containing protein.
    
   0.875
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.