STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C4A1Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
A0A484C443
Uncharacterized protein.
    
 
 0.731
A0A484CX44
Uncharacterized protein.
    
 
 0.731
A0A484C8U9
Uncharacterized protein.
   
0.602
A0A484CGI4
Uncharacterized protein.
   
0.602
A0A484CNR8
Uncharacterized protein.
   
0.602
A0A484C4F2
Uncharacterized protein.
   
  
 0.594
A0A484DGE7
Uncharacterized protein.
    
 
 0.592
A0A484C8J9
Uncharacterized protein.
    
 
 0.578
A0A484C2U3
Uncharacterized protein.
      
 0.574
A0A484D9P9
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.459
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.