Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C4F7Uncharacterized protein. (1444 aa)    
Predicted Functional Partners:
A0A484DAC4
Uncharacterized protein.
    
 
 0.985
A0A484CXH3
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 
 0.975
A0A484DDY0
DNA helicase; Belongs to the MCM family.
   
   0.974
A0A484CUC5
DNA helicase; Belongs to the MCM family.
   
 
 0.921
A0A484C2X2
Uncharacterized protein.
    
 0.889
A0A484C7N5
Uncharacterized protein.
    
 
 0.887
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
 0.865
A0A484CM13
Uncharacterized protein.
   
 
 0.864
A0A484DNA3
Uncharacterized protein.
   
 
 0.864
A0A484CHU9
Uncharacterized protein.
    
 0.860
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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