STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C4L0Uncharacterized protein. (1291 aa)    
Predicted Functional Partners:
A0A484CU27
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
 0.603
A0A484CQM9
Uncharacterized protein.
    
 
 0.581
A0A484CRN6
Uncharacterized protein.
    
 
 0.581
A0A484CX32
Uncharacterized protein.
    
 
 0.581
A0A484CYM7
Uncharacterized protein.
    
 
 0.581
A0A484CWR9
Uncharacterized protein.
     
 0.447
A0A484CJ33
Uncharacterized protein.
    
 
0.416
A0A484DBB3
UDENN domain-containing protein.
    
 
0.416
A0A484CUF3
Uncharacterized protein.
    
 
 0.408
A0A484D1A7
Brix domain-containing protein.
      
 0.408
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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