A0A484C4M1 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C4M1

Uncharacterized protein. (1472 aa)

Predicted Functional Partners:

A0A484DIB0

0.896

A0A484C7P7

0.857

A0A484C949

0.849

A0A484DCX8

0.831

A0A484BYD2

0.825

A0A484BZ77

0.825

A0A484C3T5

0.825

A0A484CS61

0.825

A0A484CLC1

0.820

A0A484CSH5

0.807

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYD2	A0A484BZ77	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.976
A0A484BYD2	A0A484C3T5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.987
A0A484BYD2	A0A484C4M1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.825
A0A484BYD2	A0A484CLC1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.822
A0A484BYD2	A0A484CS61	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.858
A0A484BZ77	A0A484BYD2	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase domain-containing protein.	0.976
A0A484BZ77	A0A484C3T5	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase domain-containing protein.	0.979
A0A484BZ77	A0A484C4M1	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.825
A0A484BZ77	A0A484CLC1	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.822
A0A484BZ77	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.858
A0A484C3T5	A0A484BYD2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.987
A0A484C3T5	A0A484BZ77	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.979
A0A484C3T5	A0A484C4M1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.825
A0A484C3T5	A0A484CLC1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.822
A0A484C3T5	A0A484CS61	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.857
A0A484C4M1	A0A484BYD2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.825
A0A484C4M1	A0A484BZ77	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.825
A0A484C4M1	A0A484C3T5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.825
A0A484C4M1	A0A484C7P7	Uncharacterized protein.	Uncharacterized protein.	0.857
A0A484C4M1	A0A484C949	Uncharacterized protein.	NYD-SP28 domain-containing protein.	0.849