STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C4X0Requiem_N domain-containing protein. (344 aa)    
Predicted Functional Partners:
A0A484BZQ0
Uncharacterized protein.
    
 0.912
A0A484C7R5
SWIB domain-containing protein.
   
 0.891
A0A484C728
SWIB domain-containing protein.
   
 0.880
A0A484DGL4
SWIB domain-containing protein.
   
 0.880
A0A484CZW8
Uncharacterized protein; Belongs to the actin family.
   
 0.877
A0A484DPH6
Bromo domain-containing protein.
    
 0.874
A0A484C9F0
ARID domain-containing protein.
    
 0.866
A0A484CFP7
ARID domain-containing protein.
    
 0.866
A0A484CI31
HMG box domain-containing protein.
   
 0.862
A0A484DMJ9
HMG box domain-containing protein.
   
 0.862
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.