Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C513Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
A0A484DHF5
LRRNT domain-containing protein.
   
  
 0.702
A0A484DEL5
Rhodopsin.
   
  
 0.694
A0A484DFF9
Rhodopsin.
   
  
 0.694
A0A484C664
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.689
A0A484CXS7
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.689
A0A484D599
Rhodopsin.
   
  
 0.688
A0A484D5F4
Rhodopsin.
   
  
 0.688
A0A484CII9
Uncharacterized protein.
   
    0.673
SL
Somatolactin.
   
    0.673
A0A484C4M4
PAS domain-containing protein.
      
 0.624
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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