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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C517Codanin-1_C domain-containing protein. (1344 aa)    
Predicted Functional Partners:
A0A484CM13
Uncharacterized protein.
    
 
 0.734
A0A484DNA3
Uncharacterized protein.
    
 
 0.734
A0A484CLI7
Uncharacterized protein.
   
    0.657
A0A484CLP5
Uncharacterized protein.
   
    0.657
A0A484CBA1
Uncharacterized protein.
    
 
 0.601
A0A484C130
Importin N-terminal domain-containing protein.
    
 
 0.540
A0A484D2V4
Uncharacterized protein.
      
 0.523
A0A484DDC2
Uncharacterized protein.
      
 0.523
A0A484CRV9
G_PROTEIN_RECEP_F3_4 domain-containing protein.
      
 0.522
A0A484CS30
Uncharacterized protein.
      
 0.432
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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