Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C522Uncharacterized protein. (1286 aa)    
Predicted Functional Partners:
A0A484C5A4
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
  0.733
A0A484D1B2
Uncharacterized protein.
    
  0.699
A0A484DE86
Uncharacterized protein.
    
  0.693
A0A484D3B0
Telo_bind domain-containing protein.
    
  0.692
A0A484DPJ0
HTH myb-type domain-containing protein.
    
  0.670
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
 0.654
A0A484DLG0
Uncharacterized protein.
     
  0.634
A0A484BXV0
Uncharacterized protein.
     
  0.623
A0A484CGQ6
PHD-type domain-containing protein.
  
  0.567
A0A484C7D0
Uncharacterized protein.
  
 
   0.550
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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