Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A484C532Lactamase_B domain-containing protein. (454 aa)    
Predicted Functional Partners:
A0A484CZN5
Amidase domain-containing protein.
     
 0.909
A0A484C8K2
Lipase_3 domain-containing protein.
      
 0.872
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 
 0.851
A0A484D5V6
Hydrolase_4 domain-containing protein.
     
 0.773
A0A484DNH6
Lipase_3 domain-containing protein.
      
 0.769
A0A484D8G8
IRG-type G domain-containing protein.
    
 
 0.749
A0A484DIN1
Uncharacterized protein; Belongs to the acid ceramidase family.
      
 0.740
A0A484CC62
Amidase domain-containing protein.
     
 0.734
A0A484D870
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.679
A0A484CC12
Uncharacterized protein.
   
 
 0.675
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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