STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C559Uncharacterized protein. (759 aa)    
Predicted Functional Partners:
A0A484DFH1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.794
A0A484DPS0
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.794
A0A484C2U0
Uncharacterized protein.
     
 0.662
A0A484CV86
Uncharacterized protein.
   
 
 0.620
A0A484DHL0
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 
 0.616
A0A484CSS7
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.577
A0A484DQT3
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
     
 0.570
A0A484CDE9
Uncharacterized protein.
    
 
 0.561
A0A484DNF9
Uncharacterized protein.
   
  
 0.537
A0A484DAY1
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
  
 0.524
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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