Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C573Glyco_tran_10_N domain-containing protein. (360 aa)    
Predicted Functional Partners:
A0A484CCA7
Hexosyltransferase.
   
 
 0.909
A0A484C0P5
Uncharacterized protein.
     
 0.908
A0A484CN66
Uncharacterized protein.
     
 0.908
A0A484CQJ8
Uncharacterized protein.
     
 0.908
A0A484CWI2
Uncharacterized protein.
     
 0.908
A0A484D5C9
Uncharacterized protein.
     
 0.908
A0A484D7I4
Uncharacterized protein.
     
 0.908
A0A484DBD8
Glyco_tran_10_N domain-containing protein.
     
 
0.900
A0A484CQX1
Uncharacterized protein.
      
 0.614
A0A484DBH8
Glycos_transf_1 domain-containing protein.
      
 0.552
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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