STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C581Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
A0A484DF69
Uncharacterized protein.
    
 0.964
A0A484DHW4
Uncharacterized protein.
   
 
 0.907
A0A484CTP5
Uncharacterized protein.
   
 
 0.896
A0A484CX35
PH domain-containing protein.
    
   0.844
A0A484DN86
Integrin beta; Belongs to the integrin beta chain family.
   
 0.824
A0A484CWF5
Integrin beta.
   
 0.813
A0A484CVS7
LIM domain-containing protein.
   
 
 0.788
A0A484DNC1
LIM domain-containing protein.
   
 
 0.788
A0A484D1H8
Uncharacterized protein.
   
 
 0.784
A0A484D2F2
Uncharacterized protein.
   
 
 0.784
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.