Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C591Uncharacterized protein. (691 aa)    
Predicted Functional Partners:
A0A484DDS7
Rtf2 domain-containing protein.
      
 0.704
A0A484C4C4
Uncharacterized protein.
      
 0.657
A0A484CH41
Uncharacterized protein.
      
 0.650
A0A484CSE3
Dynein light chain.
    
   0.538
A0A484DC08
Dynein light chain.
    
   0.538
A0A484DJI3
Dynein light chain.
    
   0.538
A0A484C022
Tubby-like protein; Belongs to the TUB family.
      
 0.503
A0A484DEH0
Tub domain-containing protein; Belongs to the TUB family.
      
 0.503
A0A484DNH4
Tubby-like protein; Belongs to the TUB family.
      
 0.503
A0A484CBB8
Uncharacterized protein.
      
 0.436
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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