STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C5C4Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (483 aa)    
Predicted Functional Partners:
A0A484CTR3
Ncstrn_small domain-containing protein.
   
 0.989
A0A484DSF5
Uncharacterized protein.
   
 0.989
A0A484DA27
Uncharacterized protein.
    
 0.962
A0A484CFK1
Uncharacterized protein.
    
 0.951
A0A484DDP5
Uncharacterized protein.
    
 0.951
A0A484CL65
Uncharacterized protein.
    
 0.934
A0A484CH09
Uncharacterized protein.
    
 0.898
A0A484CZJ4
Uncharacterized protein.
    
 0.898
A0A484CPE5
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.871
A0A484CJD4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.861
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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