Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A484C5F2Carbohydrate sulfotransferase. (352 aa)    
Predicted Functional Partners:
A0A484CYJ2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.883
A0A484CRC1
Uncharacterized protein.
      
 0.871
A0A484C8A0
Uncharacterized protein.
      
 0.690
A0A484CTG3
Glyco_transf_64 domain-containing protein.
      
 0.684
A0A484CGH1
Hexosyltransferase.
      
 0.676
A0A484DPE2
Mannosyltransferase.
   
  
 0.661
A0A484DP02
Myosin_tail_1 domain-containing protein.
      
 0.660
A0A484C9S5
Uncharacterized protein.
      
 0.655
A0A484CIA8
Hexosyltransferase.
      
 0.646
A0A484DPV5
Hexosyltransferase.
      
 0.646
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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