STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C5G9WD_REPEATS_REGION domain-containing protein. (786 aa)    
Predicted Functional Partners:
A0A484DMX3
CPSF_A domain-containing protein.
    
 0.984
A0A484CEU6
WD_REPEATS_REGION domain-containing protein.
     
 0.849
A0A484D327
WD_REPEATS_REGION domain-containing protein.
     
 0.828
A0A484D8Y6
Uncharacterized protein.
     
 0.821
A0A484CQ78
WD_REPEATS_REGION domain-containing protein.
   
 
0.807
A0A484C0L5
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
0.790
A0A484CXH1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.787
A0A484C5T4
WD_REPEATS_REGION domain-containing protein.
     
 0.782
A0A484DNA9
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.777
A0A484DR53
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.777
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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