STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C5I5Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
A0A484C8U6
Thymidylat_synt domain-containing protein.
  
 
 0.909
A0A484D3G4
DHFR domain-containing protein.
  
 
 0.903
A0A484DKW4
Thymidine kinase.
  
 
 0.903
A0A484CIR3
AB hydrolase-1 domain-containing protein.
  
 
  0.887
A0A484CEN6
Uncharacterized protein.
  
 0.882
A0A484C4E2
PYNP_C domain-containing protein.
    
 0.827
A0A484CC68
AAA domain-containing protein.
     
 0.817
A0A484C334
Uncharacterized protein.
     
 0.816
A0A484D2S7
Flavoprotein domain-containing protein.
  
 
  0.814
A0A484C4J7
Thymidylate_kin domain-containing protein.
    
 0.813
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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