STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C5J5Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (550 aa)    
Predicted Functional Partners:
A0A484CLQ6
Uncharacterized protein.
    
 0.999
A0A484CTW5
ATG11 domain-containing protein.
    
 0.999
A0A484DJI9
Protein kinase domain-containing protein.
   
 0.989
A0A484CDF1
Protein kinase domain-containing protein.
   
 0.983
A0A484DAQ1
Protein kinase domain-containing protein.
   
 0.983
A0A484C8J9
Uncharacterized protein.
    
 0.952
A0A484DMJ4
WD_REPEATS_REGION domain-containing protein.
    
 0.948
A0A484C704
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.944
A0A484C5G8
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.940
A0A484CTX9
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.940
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.