STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C5Z2Uncharacterized protein. (2661 aa)    
Predicted Functional Partners:
A0A484DKG3
SMC_N domain-containing protein.
   
 0.965
A0A484DL93
SMC hinge domain-containing protein.
   
 0.965
A0A484DKT5
Structural maintenance of chromosomes protein.
   
 0.932
A0A484CMW3
Uncharacterized protein.
   
 0.922
A0A484DL67
Uncharacterized protein.
   
 0.922
A0A484DC07
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.920
A0A484DI31
Structural maintenance of chromosomes protein.
   
 0.916
A0A484D445
SMC hinge domain-containing protein.
   
 0.915
A0A484D5P6
Structural maintenance of chromosomes protein.
   
 0.915
A0A484D6C7
SMC_N domain-containing protein.
   
 0.903
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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