Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C649DUF3399 domain-containing protein. (207 aa)    
Predicted Functional Partners:
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.890
A0A484C7Q8
Uncharacterized protein.
    
 0.711
A0A484CC94
Uncharacterized protein.
    
 0.711
A0A484CDC0
Uncharacterized protein.
    
 0.711
A0A484CXF4
Uncharacterized protein.
    
 0.711
A0A484DBZ1
Uncharacterized protein.
    
 0.711
A0A484DEQ2
Uncharacterized protein.
    
 0.711
A0A484DMD4
Uncharacterized protein.
    
 0.711
A0A484CCP0
Uncharacterized protein.
  
 0.690
A0A484C166
Uncharacterized protein.
  
 0.687
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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