Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C662LisH domain-containing protein. (383 aa)    
Predicted Functional Partners:
A0A484CH29
LID domain-containing protein.
    
 
 0.780
A0A484CWN2
LID domain-containing protein.
    
 
 0.780
A0A484DL06
LID domain-containing protein.
    
 
 0.780
A0A484CDJ0
Uncharacterized protein.
    
 
 0.750
A0A484CZR1
Uncharacterized protein.
    
 
 0.750
A0A484BZZ5
Uncharacterized protein.
    
 
 0.715
A0A484DNT8
Uncharacterized protein.
    
 
 0.715
A0A484D481
Uncharacterized protein.
    
 
 0.624
A0A484DJB6
Uncharacterized protein.
    
 
 0.604
A0A484CET4
Uncharacterized protein.
    
 
 0.599
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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